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Data Assimilation with Gaussian Mixture Models using the Dynamically Orthogonal Field Equations. Part II: Applications

Sondergaard, T. and P.F.J. Lermusiaux, 2013b. Data Assimilation with Gaussian Mixture Models using the Dynamically Orthogonal Field Equations. Part II: Applications. Monthly Weather Review, 141, 6, 1761-1785, doi:10.1175/MWR-D-11-00296.1.

The properties and capabilities of the GMM-DO filter are assessed and exemplified by applications to two dynamical systems: (1) the Double Well Diffusion and (2) Sudden Expansion flows; both of which admit far-from-Gaussian statistics. The former test case, or twin experiment, validates the use of the EM algorithm and Bayesian Information Criterion with Gaussian Mixture Models in a filtering context; the latter further exemplifies its ability to efficiently handle state vectors of non-trivial dimensionality and dynamics with jets and eddies. For each test case, qualitative and quantitative comparisons are made with contemporary filters. The sensitivity to input parameters is illustrated and discussed. Properties of the filter are examined and its estimates are described, including: the equation-based and adaptive prediction of the probability densities; the evolution of the mean field, stochastic subspace modes and stochastic coefficients; the fitting of Gaussian Mixture Models; and, the efficient and analytical Bayesian updates at assimilation times and the corresponding data impacts. The advantages of respecting nonlinear dynamics and preserving non-Gaussian statistics are brought to light. For realistic test cases admitting complex distributions and with sparse or noisy measurements, the GMM-DO filter is shown to fundamentally improve the filtering skill, outperforming simpler schemes invoking the Gaussian parametric distribution.

Data Assimilation with Gaussian Mixture Models using the Dynamically Orthogonal Field Equations. Part I: Theory and Scheme

Sondergaard, T. and P.F.J. Lermusiaux, 2013a. Data Assimilation with Gaussian Mixture Models using the Dynamically Orthogonal Field Equations. Part I. Theory and Scheme. Monthly Weather Review, 141, 6, 1737-1760, doi:10.1175/MWR-D-11-00295.1.

This work introduces and derives an efficient, data-driven assimilation scheme, focused on a time-dependent stochastic subspace, that respects nonlinear dynamics and captures non-Gaussian statistics as it occurs. The motivation is to obtain a filter that is applicable to realistic geophysical applications but that also rigorously utilizes the governing dynamical equations with information theory and learning theory for efficient Bayesian data assimilation. Building on the foundations of classical filters, the underlying theory and algorithmic implementation of the new filter are developed and derived. The stochastic Dynamically Orthogonal (DO) field equations and their adaptive stochastic subspace are employed to predict prior probabilities for the full dynamical state, effectively approximating the Fokker-Planck equation. At assimilation times, the DO realizations are fit to semiparametric Gaussian mixture models (GMMs) using the Expectation-Maximization algorithm and the Bayesian Information Criterion. Bayes’ Law is then efficiently carried out analytically within the evolving stochastic subspace. The resulting GMM-DO filter is illustrated in a very simple example. Variations of the GMM-DO filter are also provided along with comparisons with related schemes.

Numerical Schemes for Dynamically Orthogonal Equations of Stochastic Fluid and Ocean Flows

Ueckermann, M.P., P.F.J. Lermusiaux and T.P. Sapsis, 2013. Numerical Schemes for Dynamically Orthogonal Equations of Stochastic Fluid and Ocean Flows. J. Comp. Phys., 233, 272-294, doi: 10.1016/j.jcp.2012.08.041.

The quantification of uncertainties is critical when systems are nonlinear and have uncertain terms in their governing equations or are constrained by limited knowledge of initial and boundary conditions. Such situations are common in multiscale, intermittent and non- homogeneous fluid and ocean flows. The Dynamically Orthogonal (DO) field equations provide an efficient time-dependent adaptive methodology to predict the probability density functions of such flows. The present work derives efficient computational schemes for the DO methodology applied to unsteady stochastic Navier-Stokes and Boussinesq equations, and illustrates and studies the numerical aspects of these schemes. Semi-implicit projection methods are developed for the mean and for the orthonormal modes that define a basis for the evolving DO subspace, and time-marching schemes of first to fourth order are used for the stochastic coefficients. Conservative second-order finite-volumes are employed in physical space with Total Variation Diminishing schemes for the advection terms. Other results specific to the DO equations include: (i) the definition of pseudo-stochastic pressures to obtain a number of pressure equations that is linear in the subspace size in- stead of quadratic; (ii) symmetric Total Variation Diminishing-based advection schemes for the stochastic velocities; (iii) the use of generalized inversion to deal with singular subspace covariances or deterministic modes; and (iv) schemes to maintain orthonormal modes at the numerical level. To verify the correctness of our implementation and study the properties of our schemes and their variations, a set of stochastic flow benchmarks are defined including asymmetric Dirac and symmetric lock-exchange flows, lid-driven cavity flows, and flows past objects in a confined channel. Different Reynolds number and Grashof number regimes are employed to illustrate robustness. Optimal convergence under both time and space refinements is shown as well as the convergence of the probability density functions with the number of stochastic realizations.

Coupled 4D-variational physical and biological data assimilation in the California Current System

Speaker: Hajoon Song
[Announcement (PDF)]
Speaker Affiliation: University of California, Santa Cruz
Date: Friday 18 Jan at 11:30AM in 5-314

Stochastic Assimilation for the Next Generation Ocean Model Applications (SANGOMA)

Prof. Pierre Lermusiaux is an invited international external adviser to the European project Stochastic Assimilation for the Next Generation Ocean Model Applications (SANGOMA), which will be providing new developments in data assimilation for future operational forecasting and monitoring systems. He is giving a talk on Bayesian Data Assimilation and Learning of Stochastic Dynamical Models: State, Parameters, also Model Structures at their first annual meeting.