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Persistent Lagrangian Material Coherence in Fluid and Ocean Flows Using Flow Map Composition

Kulkarni, C.S. and P.F.J. Lermusiaux, 2024. Persistent Lagrangian Material Coherence in Fluid and Ocean Flows Using Flow Map Composition. Ocean Modelling, sub-judice.

In this work, we analyze Lagrangian material coherence in dynamic open domains. We derive and apply new theory and efficient schemes to extract material sets in dynamic flow fields that remain the most or the least coherent throughout the time interval of interest, with special attention to realistic ocean domains that have multiple time-dependent inlets and/or outlets. First, the partial differential equation (PDE)-based method of composition is extended to efficiently compute flow maps in open domains, evolving a dynamic mask field without compounding numerical errors. This permits the use of existing grid based PDE solvers to compute flow maps on their dynamic non-regular domain. Inherent parallelization capabilities with accuracy as trajectory-based schemes but importantly with also an optimal grid-based resolution make this method very attractive. Second, we derive a novel approach to compute material sets in dynamic fluid flows that undergo minimal stress throughout the considered time interval. The level sets of the proposed metric, called the ‘extended polar distance’, yield material subdomains that remain rigid (i.e. only undergo translation and rotation) throughout the time interval of interest up to a certain tolerance. This metric and the corresponding persistently coherent sets and incoherent sets are computed using the PDE-based flow map computation. We further relate the extended polar distance and the diffusion barrier strength metric and show that the extended polar distance rigorously cumulates the tendency of a material subdomain to be prone to diffusion and the average strain it undergoes. We utilize the new theory and numerical methods to analyze Lagrangian coherence in analytical and realistic scenarios – an analytical unsteady double gyre flow and a realistic simulation in the Southern Pacific Ocean. The former helps us better understand the proposed theory in practice, and highlights the evolution of coherent, persistently coherent, and incoherent sets. In the latter Southern Pacific Ocean application, we find that the surface regions around Palau island are highly incoherent due to the steep topography and complex interactive dynamics. However, we also find a rigid set advected by the larger-scale currents around the Island, retrieving its shape at the end, as well as a persistently rigid set that approximately maintains its shape throughout the time interval, maximally resisting advective stretching and diffusive transport.

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Rigid Sets and Coherent Sets in Realistic Ocean Flows

Feppon, F. and P.F.J. Lermusiaux, 2024. Rigid Sets and Coherent Sets in Realistic Ocean Flows. Nonlinear Processes in Geophysics, sub-judice. doi:10.5194/npg-2022-1

This paper focuses on the extractions of Lagrangian Coherent Sets from realistic velocity fields obtained from ocean data and simulations, each of which can be highly resolved and non volume-preserving. We introduce two novel methods for computing two formulations of such sets. First, we propose a new “diffeomorphism-based” criterion to extract “rigid sets”, defined as sets over which the flow map acts approximately as a rigid transformation. Second, we develop a matrix-free methodology that provides a simple and efficient framework to compute “coherent sets” with operator methods. Both new methods and their resulting rigid sets and coherent sets are illustrated and compared using three numerically simulated flow examples, including a high-resolution realistic, submesoscale to large-scale dynamic ocean current field in the Palau Island region of the western Pacific Ocean.

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Lagrangian Surface Signatures Reveal Upper-Ocean Vertical Displacement Conduits Near Oceanic Density Fronts

Aravind, H.M., V. Verma, S. Sarkar, M.A. Freilich, A. Mahadevan, P.J. Haley Jr., P.F.J. Lermusiaux, and M.R. Allshouse, 2023. Lagrangian Surface Signatures Reveal Upper-Ocean Vertical Displacement Conduits Near Oceanic Density Fronts. Ocean Modelling 181, 102136. doi:10.1016/j.ocemod.2022.102136

Vertical transport in the ocean plays a critical role in the exchange of freshwater, heat, nutrients, and other biogeochemical tracers. While there are situations where vertical fluxes are important, studying the vertical transport and displacement of material requires analysis over a finite interval of time. One such example is the subduction of fluid from the mixed layer into the pycnocline, which is known to occur near density fronts. Divergence has been used to estimate vertical velocities indicating that surface measurements, where observational data is most widely available, can be used to locate these vertical transport conduits. We evaluate the correlation between surface signatures derived from Eulerian (horizontal divergence, density gradient, and vertical velocity) and Lagrangian (dilation rate and finite time Lyapunov exponent) metrics and vertical displacement conduits. Two submesoscale resolving models of density fronts and a data-assimilative model of the western Mediterranean were analyzed. The Lagrangian surface signatures locate significantly more of the strongest displacement features and the difference in the expected displacements relative to Eulerian ones increases with the length of the time interval considered. Ensemble analysis of forecasts from the Mediterranean model demonstrates that the Lagrangian surface signatures can be used to identify regions of strongest downward vertical displacement even without knowledge of the true ocean state.

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Coastal Circulation and Water Transport Properties of the Red Sea Project Lagoon

Zhan, P., G. Krokos, S. Langodan, D. Guo, H. Dasari, V.P. Papadopoulos, P.F.J. Lermusiaux, O.M. Knio, and I. Hoteit, 2021. Coastal Circulation and Water Transport Properties of the Red Sea Project Lagoon. Ocean Modelling 161, 101791. doi:10.1016/j.ocemod.2021.101791

The Red Sea Project (RSP) is based on a coastal lagoon with over 90 pristine islands. The project intends to transform the Red Sea coast into a world-class tourist destination. To better understand the regional dynamics and water exchange scenarios in the lagoon, a high-resolution numerical model is implemented. The general and tidal circulation dynamics are then investigated with a particular focus on the response of the lagoon to strong wind jets. Significant variations in winter and summer circulation patterns are identified. The tidal amplitude inside the lagoon is greater than that outside, with strong tidal currents passing over its surrounding coral reef banks. The lagoon rapidly responds to the strong easterly wind jets that occur mainly in winter; it develops a reverse flow at greater depths, and the coastal water elevation is instantly affected. Lagrangian particle simulations are conducted to study the residence time of water in the lagoon. The results suggest that water renewal is slow in winter. Analysis of the Lagrangian coherent structures (LCS) reveals that water renewal is largely linked to the circulation patterns in the lagoon. In winter, the water becomes restricted in the central lagoon with only moderate exchange, whereas in summer, more circulation is observed with a higher degree of interaction between the central lagoon and external water. The results of LCS also highlight the tidal contribution to stirring and mixing while identifying the hotspots of the phenomenon. Our analysis demonstrates an effective approach for studying regional water mixing and connectivity, which could support coastal management in data-limited regions.

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Extent of Impact of Deep-Sea Nodule Mining Midwater Plumes Is Influenced by Sediment Loading, Turbulence and Thresholds

Muñoz-Royo, C., T. Peacock, M.H. Alford, J. Smith, A. Le Boyer, C.S. Kulkarni, P.F.J. Lermusiaux, P.J. Haley, Jr., C. Mirabito, D. Wang, E. Eric Adams, R. Ouillon, A. Breugem, B. Decrop, T. Lanckriet, R.B. Supekar, A.J. Rzeznik, A. Gartman, and S.-J. Ju, 2021. Extent of Impact of Deep-Sea Nodule Mining Midwater Plumes Is Influenced by Sediment Loading, Turbulence and Thresholds. Nature Communications Earth & Environment 2(148), pp. 1-16. doi:10.1038/s43247-021-00213-8

Deep-sea polymetallic nodule mining research activity has substantially increased in recent years, but the expected level of environmental impact is still being established. One environmental concern is the discharge of a sediment plume into the midwater column. We performed a dedicated field study using sediment from the Clarion Clipperton Fracture Zone. The plume was monitored and tracked using both established and novel instrumentation, including acoustic and turbulence measurements. Our field studies reveal that modeling can reliably predict the properties of a midwater plume in the vicinity of the discharge and that sediment aggregation effects are not significant. The plume model is used to drive a numerical simulation of a commercial-scale operation in the Clarion Clipperton Fracture Zone. Key takeaways are that the scale of impact of the plume is notably influenced by the values of environmentally acceptable threshold levels, the quantity of discharged sediment, and the turbulent diffusivity in the Clarion Clipperton Fracture Zone.

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Search and Rescue at Sea Aided by Hidden Flow Structures

Serra, M., P. Sathe, I. Rypina, A. Kirincich, S.D. Ross, P.F.J. Lermusiaux, A. Allen, T. Peacock, and G. Haller, 2020. Search and Rescue at Sea Aided by Hidden Flow Structures. Nature Communications 11, 1-7. doi:10.1038/s41467-020-16281-x

Every year, hundreds of people die at sea because of vessel and airplane accidents. A key challenge in reducing the number of these fatalities is to make Search and Rescue (SAR) algorithms more efficient. Here, we address this challenge by uncovering hidden TRansient Attracting Profiles (TRAPs) in ocean-surface velocity data. Computable from a single velocity-field snapshot, TRAPs act as short-term attractors for all floating objects. In three different ocean field experiments, we show that TRAPs computed from measured as well as modeled velocities attract deployed drifters and manikins emulating people fallen in the water. TRAPs, which remain hidden to prior flow diagnostics, thus provide critical information for hazard responses, such as SAR and oil spill containment, and hence have the potential to save lives and limit environmental disasters.

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Advection without Compounding Errors through Flow Map Composition

Kulkarni, C.S. and P.F.J. Lermusiaux, 2019. Advection without Compounding Errors through Flow Map Composition. Journal of Computational Physics, 398, 108859. doi:10.1016/j.jcp.2019.108859

We propose a novel numerical methodology to compute the advective transport and diffusion-reaction of tracer quantities. The tracer advection occurs through flow map composition and is super-accurate, yielding numerical solutions almost devoid of compounding numerical errors, while allowing for direct parallelization in the temporal direction. It is computed by implicitly solving the characteristic evolution through a modified transport partial differential equation and domain decomposition in the temporal direction, followed by composition with the known initial condition. This advection scheme allows a rigorous computation of the spatial and temporal error bounds, yields an accuracy comparable to that of Lagrangian methods, and maintains the advantages of Eulerian schemes. We further show that there exists an optimal value of the composition timestep that yields the minimum total numerical error in the computations, and derive the expression for this value. We develop schemes for the addition of tracer diffusion, reaction, and source terms, and for the implementation of boundary conditions. Finally, the methodology is applied in three flow examples, namely an analytical reversible swirl flow, an idealized flow exiting a strait undergoing sudden expansion, and a realistic ocean flow in the Bismarck sea. New benchmark problems for advection-diffusion-reaction schemes are developed and used to compare and contrast results with those of classic schemes. The results highlight the theoretical properties of the methodology as well as its efficiency, super-accuracy with minimal numerical errors, and applicability in realistic simulations.
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Multiscale multiphysics data-informed modeling for three-dimensional ocean acoustic simulation and prediction

Duda, T.F., Y.-T. Lin, A.E. Newhall, K.R. Helfrich, J.F. Lynch, W.G. Zhang, P.F.J. Lermusiaux, and J. Wilkin, 2019. Multiscale Multiphysics Data-Informed Modeling for Three-Dimensional Ocean Acoustic Simulation and Prediction. Journal of the Acoustical Society of America, 146(3), 1996–2015. doi:10.1121/1.5126012

Three-dimensional (3D) underwater sound field computations have been used for a few decades to understand sound propagation effects above sloped seabeds and in areas with strong 3D temperature and salinity variations. For an approximate simulation of effects in nature, the necessary 3D sound-speed field can be made from snapshots of temperature and salinity from an operational data-driven regional ocean model. However, these models invariably have resolution constraints and physics approximations that exclude features that can have strong effects on acoustics, example features being strong submesoscale fronts and nonhydrostatic nonlinear internal waves (NNIWs). Here, work to predict NNIW fields to improve 3D acoustic forecasts using an NNIW model nested in a tide-inclusive data-assimilating regional model is reported. The work was initiated under the Integrated Ocean Dynamics and Acoustics project. The project investigated ocean dynamical processes that affect important details of sound-propagation, with a focus on those with strong intermittency (high kurtosis) that are challenging to predict deterministically. Strong internal tides and NNIW are two such phenomena, with the former being precursors to NNIW, often feeding energy to them. Successful aspects of the modeling are reported along with weaknesses and unresolved issues identified in the course of the work.
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Dynamically Orthogonal Numerical Schemes for Efficient Stochastic Advection and Lagrangian Transport

Feppon, F. and P.F.J. Lermusiaux, 2018. Dynamically Orthogonal Numerical Schemes for Efficient Stochastic Advection and Lagrangian Transport. SIAM Review, 60(3), 595–625. doi:10.1137/16m1109394

Quantifying the uncertainty of Lagrangian motion can be performed by solving a large number of ordinary differential equations with random velocities, or equivalently a stochastic transport partial differential equation (PDE) for the ensemble of flow-maps. The Dynamically Orthogonal (DO) decomposition is applied as an efficient dynamical model order reduction to solve for such stochastic advection and Lagrangian transport. Its interpretation as the method that applies instantaneously the truncated SVD on the matrix discretization of the original stochastic PDE is used to obtain new numerical schemes. Fully linear, explicit central advection schemes stabilized with numerical filters are selected to ensure efficiency, accuracy, stability, and direct consistency between the original deterministic and stochastic DO advections and flow-maps. Various strategies are presented for selecting a time-stepping that accounts for the curvature of the fixed rank manifold and the error related to closely singular coefficient matrices. Efficient schemes are developed to dynamically evolve the rank of the reduced solution and to ensure the orthogonality of the basis matrix while preserving its smooth evolution over time. Finally, the new schemes are applied to quantify the uncertain Lagrangian motions of a 2D double gyre flow with random frequency and of a stochastic flow past a cylinder.

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Evolving the subspace of the three-dimensional multiscale ocean variability: Massachusetts Bay

Lermusiaux, P.F.J., 2001. Evolving the subspace of the three-dimensional multiscale ocean variability: Massachusetts Bay. Journal of Marine Systems, Special issue on "Three-dimensional ocean circulation: Lagrangian measurements and diagnostic analyses", 29/1-4, 385-422, doi: 10.1016/S0924-7963(01)00025-2.

A data and dynamics driven approach to estimate, decompose, organize and analyze the evolving three-dimensional variability of ocean fields is outlined. Variability refers here to the statistics of the differences between ocean states and a reference state. In general, these statistics evolve in time and space. For a first endeavor, the variability subspace defined by the dominant eigendecomposition of a normalized form of the variability covariance is evolved. A multiscale methodology for its initialization and forecast is outlined. It combines data and primitive equation dynamics within a Monte-Carlo approach. The methodology is applied to part of a multidisciplinary experiment that occurred in Massachusetts Bay in late summer and early fall of 1998. For a 4-day time period, the three-dimensional and multivariate properties of the variability standard deviations and dominant eigenvectors are studied. Two variability patterns are discussed in detail. One relates to a displacement of the Gulf of Maine coastal current offshore from Cape Ann, with the creation of adjacent mesoscale recirculation cells. The other relates to a Bay-wide coastal upwelling mode from Barnstable Harbor to Gloucester in response to strong southerly winds. Snapshots and tendencies of physical fields and trajectories of simulated Lagrangian drifters are employed to diagnose and illustrate the use of the dominant variability covariance. The variability subspace is shown to guide the dynamical analysis of the physical fields. For the stratified conditions, it is found that strong wind events can alter the structures of the buoyancy flow and that circulation features are more variable than previously described, on multiple scales. In several locations, the factors estimated to be important include some or all of the atmospheric and surface pressure forcings, and associated Ekman transports and downwelling/upwelling processes, the Coriolis force, the pressure force, inertia and mixing.
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